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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs7215983 chr17:37524561 C/T 0.000263 484 15.8 16.37 15.83 KM Plot
THCA rs721651 chr1:41563329 A/C 2.8E-7 490 17.47 17.73 14.93 KM Plot
THCA rs72201432 chr14:36273776 AAAATAAATAAATAAAT/A 5.12E-6 489 15.97 16.35 8.33 KM Plot
THCA rs72202950 chr16:20684019 GTA/G 1.07E-6 488 15.9 15.17 42.77 KM Plot
THCA rs72206692 chr7:75873864 TGAA/T 0.000126 484 16.43 16.57 11.3 KM Plot
THCA rs7221117 chr17:37533776 C/T 0.000263 485 15.7 16.37 15.83 KM Plot
THCA rs72255304 chr4:187178141 GTC/G 7.3E-5 485 14.9 16.3 15.68 KM Plot
THCA rs72322901 chr4:84630893 GGGT/G 5.88E-6 483 16.2 12.7 18.47 KM Plot
THCA rs7241519 chr18:21183876 G/A 3.87E-5 469 15.7 16.38 14.15 KM Plot
THCA rs7246249 chr19:58242293 C/T 5.62E-5 489 15.52 16.3 15.13 KM Plot
THCA rs72481098 chr16:20624371 A/G 3.58E-6 485 16.02 17.55 14.27 KM Plot
THCA rs7248679 chr19:43585404 A/T 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs7248867 chr19:15870204 A/G 0.000308 490 19.13 14.93 16.33 KM Plot
THCA rs7248878 chr19:43585325 G/A 4.99E-5 480 15.32 17.77 17.77 KM Plot
THCA rs7251215 chr19:34407747 C/T 2.37E-5 490 19.13 15.7 15.27 KM Plot